CDS

Accession Number TCMCG017C02799
gbkey CDS
Protein Id OMP10864.1
Location complement(join(1814..1916,2150..2226,2846..2997,3197..3434,3576..3635,3964..4054,4201..4225,4463..4469))
Organism Corchorus olitorius
locus_tag COLO4_04209

Protein

Length 250aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01011183.1
Definition hypothetical protein COLO4_04209 [Corchorus olitorius]
Locus_tag COLO4_04209

EGGNOG-MAPPER Annotation

COG_category A
Description tRNA rRNA methyltransferase (SpoU) family protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K15333        [VIEW IN KEGG]
EC 2.1.1.34        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000154        [VIEW IN EMBL-EBI]
GO:0000451        [VIEW IN EMBL-EBI]
GO:0000453        [VIEW IN EMBL-EBI]
GO:0001510        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008168        [VIEW IN EMBL-EBI]
GO:0008171        [VIEW IN EMBL-EBI]
GO:0008173        [VIEW IN EMBL-EBI]
GO:0008175        [VIEW IN EMBL-EBI]
GO:0008649        [VIEW IN EMBL-EBI]
GO:0008757        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016423        [VIEW IN EMBL-EBI]
GO:0016435        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016741        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030488        [VIEW IN EMBL-EBI]
GO:0031167        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070039        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140101        [VIEW IN EMBL-EBI]
GO:0140102        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATGATAAGGAGGCAGACGGTGGCCTTTGCTTGCGAGCTTCAATGGAAGGCTATCTTGATGCTTATAATCCAAAGATCTCTGTTACTCCTGCTGGAATTTTTGTTAGTCGGGTAGAGGAGGAAATCGAGTTTAAATGTGTTCCAACATCCCACATGGAGAAAGTGCTCAACTTCTTAAATGATGTGAGGGAAGATCTGAGGTGTTCAATGGCAAAGGATACTGTGACAATCAAGAATGAGAGTCTGGATATGGGTGAAAGTGCCGAATCAATTGAGAGACAGTCTACTGCTCCTGACGAGATAACTAAAGATGCACATATGGACTTCCAGAAAAAGATTACTTTTGCTAAACATGAGAAGCAAGACATGAATTCCAGCTCATTATTAAGCAAGGGAGAAGTGTACAAGCAACTTGTAGAAATGGAAAAGGAAGACAATCTTGTTGATCAGTTATTGAAGTCTAGAAGCATGGCTATGGAATGGATAAGAGGAAACCGACAGCATATTATCCTAGTAGCATCGTTGATTGATCGCATACCAAACCTTGCTGGATTGGCACGCACATGTGAGATGGATCCTTTGGCTTCTGTCAGCGAAGAGCTAGCGGAGATCGACGGACAAATCGCCGACATTTTTCGAGCTCTATCAAATGGATTCCAGAAATTGGAGAAGGTTAAGGATGTCAGTAGGCAGAGTAGGCAATTGGAAGAGCTTACTGATAAGATGCGTGACTGTAAGAGGTATTTCTAG
Protein:  
MDDKEADGGLCLRASMEGYLDAYNPKISVTPAGIFVSRVEEEIEFKCVPTSHMEKVLNFLNDVREDLRCSMAKDTVTIKNESLDMGESAESIERQSTAPDEITKDAHMDFQKKITFAKHEKQDMNSSSLLSKGEVYKQLVEMEKEDNLVDQLLKSRSMAMEWIRGNRQHIILVASLIDRIPNLAGLARTCEMDPLASVSEELAEIDGQIADIFRALSNGFQKLEKVKDVSRQSRQLEELTDKMRDCKRYF